Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28aQ8CEI3 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc28aQ8CEI3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28aQ8CEI3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28aQ8CEI3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28aQ8CEI3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc28aQ8CEI3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Btrc-209ENSMUST00000224478 2194 ntBASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28aQ8CEI3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms