Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gm11478-201ENSMUST00000117851 599 ntBASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Gm19287-201ENSMUST00000203190 358 ntBASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc28bQ8CEG5 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28bQ8CEG5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms