Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Gm3961-201ENSMUST00000204425 994 ntBASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Gm21769-201ENSMUST00000211922 111 ntBASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fam43aQ8BUP8 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC12.96□□□□□ -0.34
Fam43aQ8BUP8 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm11222-201ENSMUST00000119005 738 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm31256-201ENSMUST00000194705 506 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm42608-201ENSMUST00000197563 2018 ntBASIC12.95□□□□□ -0.34
Fam43aQ8BUP8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gm37759-201ENSMUST00000194155 3246 ntBASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gm38169-201ENSMUST00000191822 2539 ntBASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gm17376-201ENSMUST00000166016 84 ntBASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fam43aQ8BUP8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms