Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm15004-201ENSMUST00000119192 630 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm25881-201ENSMUST00000157783 103 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm8343-201ENSMUST00000182705 994 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm43184-201ENSMUST00000197247 542 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm9797-202ENSMUST00000218003 294 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4Q8BQZ5 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm12196-201ENSMUST00000120954 262 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm20426-201ENSMUST00000173657 440 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm28686-201ENSMUST00000187404 609 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm43138-201ENSMUST00000199123 708 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm18753-201ENSMUST00000201000 566 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Gm21811-201ENSMUST00000096485 930 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4Q8BQZ5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms