Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm24933-201ENSMUST00000103762 110 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm23252-201ENSMUST00000103776 110 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm4462-201ENSMUST00000166453 492 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm26443-201ENSMUST00000179610 110 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm8601-201ENSMUST00000182096 909 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm37723-201ENSMUST00000194480 565 ntBASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm33707-201ENSMUST00000195135 569 ntBASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.86□□□□□ -0.03
Col16a1Q8BLX7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Mir8091-201ENSMUST00000183602 139 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 AC154436.1-201ENSMUST00000227272 782 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 AC121357.1-201ENSMUST00000227365 608 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 AC107763.1-201ENSMUST00000226082 1365 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Mir744-201ENSMUST00000103261 100 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm16209-201ENSMUST00000118457 627 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm10171-201ENSMUST00000126220 628 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm7445-201ENSMUST00000192115 340 ntBASIC14.85□□□□□ -0.03
Col16a1Q8BLX7 Gm7880-201ENSMUST00000203748 871 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms