Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm6794-201ENSMUST00000203829 457 ntBASIC16.11■□□□□ 0.17
Usp54Q8BL06 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp54Q8BL06 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 CT025603.1-201ENSMUST00000224040 448 ntBASIC16.11■□□□□ 0.17
Usp54Q8BL06 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp54Q8BL06 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.11■□□□□ 0.17
Usp54Q8BL06 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp54Q8BL06 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm9574-201ENSMUST00000173127 845 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm7928-201ENSMUST00000181249 701 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm43972-201ENSMUST00000181398 1467 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm37160-201ENSMUST00000193081 1689 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 CT030195.2-201ENSMUST00000226074 1286 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 AC164099.1-201ENSMUST00000227780 333 ntBASIC16.1■□□□□ 0.17
Usp54Q8BL06 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp54Q8BL06 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm12947-201ENSMUST00000116114 420 ntBASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.09■□□□□ 0.17
Usp54Q8BL06 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm8659-201ENSMUST00000120024 1084 ntBASIC16.09■□□□□ 0.17
Usp54Q8BL06 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Gm17796-201ENSMUST00000189015 1213 ntBASIC16.09■□□□□ 0.17
Usp54Q8BL06 Wbp1-209ENSMUST00000205023 716 ntBASIC16.09■□□□□ 0.17
Usp54Q8BL06 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Usp54Q8BL06 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp54Q8BL06 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp54Q8BL06 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC16.08■□□□□ 0.17
Usp54Q8BL06 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp54Q8BL06 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms