Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm45224-201ENSMUST00000208203 414 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm807-202ENSMUST00000224929 408 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm28937-201ENSMUST00000185413 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm29400-201ENSMUST00000187208 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm28662-201ENSMUST00000188446 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm28251-201ENSMUST00000188835 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm37318-201ENSMUST00000194325 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm38017-201ENSMUST00000194768 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm37287-201ENSMUST00000195449 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm37793-201ENSMUST00000195548 695 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.79□□□□□ -0.52
Chmp2bQ8BJF9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Mir8109-201ENSMUST00000184375 117 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gm44651-201ENSMUST00000207343 372 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms