Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm8756-201ENSMUST00000183250 929 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Mir744-201ENSMUST00000103261 100 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm13171-201ENSMUST00000117233 391 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm8019-201ENSMUST00000119317 587 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm11952-201ENSMUST00000121172 821 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm26313-201ENSMUST00000157770 308 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm16547-201ENSMUST00000159474 293 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm25872-201ENSMUST00000177784 100 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm19918-201ENSMUST00000194858 400 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trnp1Q80ZI1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Gm15982-201ENSMUST00000121681 554 ntBASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trnp1Q80ZI1 Gm16165-201ENSMUST00000160140 795 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms