Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srrm3Q80WV7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.06□□□□□ -0.48
Srrm3Q80WV7 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm26361-201ENSMUST00000158868 186 ntBASIC12.05□□□□□ -0.48
Srrm3Q80WV7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm25951-201ENSMUST00000175330 64 ntBASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm3Q80WV7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Gm23270-201ENSMUST00000104055 131 ntBASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm3Q80WV7 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms