Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm44958-201ENSMUST00000203734 736 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm12990-201ENSMUST00000120372 468 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm42511-201ENSMUST00000196160 234 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm4604-201ENSMUST00000025040 390 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm5455-201ENSMUST00000058710 715 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf38bQ80SY5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms