Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Olfml3-204ENSMUST00000169286 874 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm37782-201ENSMUST00000194879 678 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm43506-201ENSMUST00000200675 753 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm45094-201ENSMUST00000207013 617 ntBASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx55Q6ZPL9 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.08□□□□□ -0.31
Ddx55Q6ZPL9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Gm5449-201ENSMUST00000081132 357 ntBASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ddx55Q6ZPL9 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms