Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm9083-201ENSMUST00000120423 819 ntBASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm43002-201ENSMUST00000200310 155 ntBASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gm7653-201ENSMUST00000214567 508 ntBASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rnf220Q6PDX6 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf220Q6PDX6 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf220Q6PDX6 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf220Q6PDX6 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Rnf220Q6PDX6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm13736-201ENSMUST00000119272 253 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm11591-201ENSMUST00000120063 702 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm12502-201ENSMUST00000120197 444 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm44405-201ENSMUST00000198952 126 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm5781-201ENSMUST00000219792 443 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms