Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm4857-201ENSMUST00000192718 785 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt39Q6IFX4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt39Q6IFX4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm15808-201ENSMUST00000119046 604 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm25700-201ENSMUST00000177693 110 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Rps4l-202ENSMUST00000204242 789 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms