Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm8617-201ENSMUST00000118796 2222 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 AC123857.2-201ENSMUST00000225756 1582 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm24830-201ENSMUST00000102024 166 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm22323-201ENSMUST00000103832 109 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm11531-201ENSMUST00000117614 555 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm14550-201ENSMUST00000117918 407 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm11597-201ENSMUST00000121423 964 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC8.88□□□□□ -0.99
Foxc1Q61572 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm13570-201ENSMUST00000140763 309 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm15276-201ENSMUST00000145953 498 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm25890-201ENSMUST00000177643 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Rnu1b2-201ENSMUST00000178073 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Rnu1b1-201ENSMUST00000178250 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm22614-201ENSMUST00000178300 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm27046-201ENSMUST00000182160 463 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm44656-201ENSMUST00000208428 490 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm5950-201ENSMUST00000213337 772 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 AC125209.1-201ENSMUST00000225812 766 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm22042-201ENSMUST00000082989 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm24919-201ENSMUST00000083020 106 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm26232-201ENSMUST00000083360 166 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm24136-201ENSMUST00000083374 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Rnu1b6-201ENSMUST00000083839 166 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm26110-201ENSMUST00000083971 165 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms