Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ift88Q61371 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ift88Q61371 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ift88Q61371 Btrc-209ENSMUST00000224478 2194 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.71□□□□□ -0.37
Ift88Q61371 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm11509-201ENSMUST00000117358 325 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Gm12463-201ENSMUST00000118271 849 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.71□□□□□ -0.37
Ift88Q61371 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm5616-201ENSMUST00000165252 384 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Gm8741-201ENSMUST00000174736 384 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 AA914427-201ENSMUST00000193194 1166 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Gm43184-201ENSMUST00000197247 542 ntBASIC12.71□□□□□ -0.37
Ift88Q61371 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.71□□□□□ -0.37
Ift88Q61371 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ift88Q61371 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ift88Q61371 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.71□□□□□ -0.38
Ift88Q61371 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ift88Q61371 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.71□□□□□ -0.38
Ift88Q61371 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ift88Q61371 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ift88Q61371 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ift88Q61371 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.71□□□□□ -0.38
Ift88Q61371 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ift88Q61371 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.7□□□□□ -0.38
Ift88Q61371 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm15276-201ENSMUST00000145953 498 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm25700-201ENSMUST00000177693 110 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Mir8109-201ENSMUST00000184375 117 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.7□□□□□ -0.38
Ift88Q61371 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ift88Q61371 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.7□□□□□ -0.38
Ift88Q61371 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ift88Q61371 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms