Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm44329-201ENSMUST00000197469 112 ntBASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.81□□□□□ -0.2
Vps54Q5SPW0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm4294-201ENSMUST00000105169 614 ntBASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm8111-201ENSMUST00000117659 987 ntBASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm25492-201ENSMUST00000157383 129 ntBASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps54Q5SPW0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gm14942-201ENSMUST00000119642 336 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gm37826-201ENSMUST00000195329 322 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gm43966-201ENSMUST00000203301 612 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Gm29787-201ENSMUST00000222129 849 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps54Q5SPW0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms