Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav3-3Q5R1C3 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm15703-201ENSMUST00000120250 880 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm14704-201ENSMUST00000120300 874 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mir1894-201ENSMUST00000122802 81 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm37497-201ENSMUST00000195830 798 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gm44882-201ENSMUST00000205702 802 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav3-3Q5R1C3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav3-3Q5R1C3 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms