Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm23912-201ENSMUST00000104687 87 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm12407-201ENSMUST00000180219 324 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm18514-201ENSMUST00000218980 436 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp48Q3V0C5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp48Q3V0C5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms