Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Gm24294-201ENSMUST00000158295 277 ntBASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fam196aQ3USH1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm13192-201ENSMUST00000101199 208 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm10443-201ENSMUST00000119024 210 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm20568-201ENSMUST00000197129 208 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm31274-201ENSMUST00000197356 229 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm6518-201ENSMUST00000208450 342 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fam196aQ3USH1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms