Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.58□□□□□ -0.24
Limch1Q3UH68 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.58□□□□□ -0.24
Limch1Q3UH68 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Limch1Q3UH68 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Limch1Q3UH68 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limch1Q3UH68 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm12857-201ENSMUST00000117678 592 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm27530-201ENSMUST00000184096 98 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Mir7686-201ENSMUST00000200604 57 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm45550-201ENSMUST00000209380 946 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm10752-201ENSMUST00000218348 729 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm37744-201ENSMUST00000194616 1590 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limch1Q3UH68 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.57□□□□□ -0.24
Limch1Q3UH68 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm6754-201ENSMUST00000117124 913 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm10288-201ENSMUST00000084614 537 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.56□□□□□ -0.24
Limch1Q3UH68 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms