Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm24543-201ENSMUST00000103867 82 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm16202-201ENSMUST00000117532 544 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm9136-201ENSMUST00000193368 454 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm43514-201ENSMUST00000198852 424 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm15477-202ENSMUST00000143945 2351 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm15653-201ENSMUST00000119247 907 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm9824-201ENSMUST00000178707 561 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm18766-201ENSMUST00000189811 808 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm44297-201ENSMUST00000198304 141 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm6439-201ENSMUST00000199849 862 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Mzt1-203ENSMUST00000227948 952 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm43615-201ENSMUST00000197465 1773 ntBASIC9.41□□□□□ -0.9
Trim63Q38HM4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim63Q38HM4 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms