Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tff1Q08423 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.59□□□□□ -0.87
Tff1Q08423 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.59□□□□□ -0.87
Tff1Q08423 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tff1Q08423 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Tff1Q08423 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tff1Q08423 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Tff1Q08423 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Tff1Q08423 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.58□□□□□ -0.88
Tff1Q08423 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm9211-201ENSMUST00000182882 975 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm45224-201ENSMUST00000208203 414 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Gm8913-201ENSMUST00000209491 641 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Spcs1-203ENSMUST00000226374 592 ntBASIC9.58□□□□□ -0.88
Tff1Q08423 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Tff1Q08423 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Tff1Q08423 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tff1Q08423 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tff1Q08423 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Tff1Q08423 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Tff1Q08423 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Tff1Q08423 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.57□□□□□ -0.88
Tff1Q08423 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.57□□□□□ -0.88
Tff1Q08423 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Tff1Q08423 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms