Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm12791-201ENSMUST00000120788 655 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.46□□□□□ -0.41
Col9a2Q07643 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm26047-201ENSMUST00000157308 113 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm8723-201ENSMUST00000166076 820 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm8701-201ENSMUST00000169259 874 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Olfml3-204ENSMUST00000169286 874 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm42518-201ENSMUST00000196277 938 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm42816-201ENSMUST00000198433 325 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm26047-202ENSMUST00000198840 115 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm18059-201ENSMUST00000208073 580 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.46□□□□□ -0.41
Col9a2Q07643 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Col9a2Q07643 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Col9a2Q07643 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col9a2Q07643 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col9a2Q07643 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.45□□□□□ -0.42
Col9a2Q07643 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a2Q07643 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms