Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm11660-201ENSMUST00000120955 412 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm37666-201ENSMUST00000194110 866 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 AU022133-201ENSMUST00000200601 873 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm2553-201ENSMUST00000215986 605 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 AC126257.1-201ENSMUST00000213195 1536 ntBASIC8.94□□□□□ -0.98
Cdx4Q07424 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx4Q07424 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cdx4Q07424 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm14058-201ENSMUST00000116082 735 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm5419-201ENSMUST00000119301 527 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm7722-201ENSMUST00000120646 741 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm7003-201ENSMUST00000195089 312 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm43947-201ENSMUST00000203019 959 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm19287-201ENSMUST00000203190 358 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm17931-201ENSMUST00000208132 634 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm18393-201ENSMUST00000208349 1131 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm7848-201ENSMUST00000210739 718 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm5455-201ENSMUST00000058710 715 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm26448-201ENSMUST00000082446 203 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm21811-201ENSMUST00000096485 930 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm5525-201ENSMUST00000190438 1312 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx4Q07424 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx4Q07424 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.93□□□□□ -0.98
Cdx4Q07424 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx4Q07424 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms