Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.94□□□□□ -0.66
Nkx3-2P97503 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm10807-201ENSMUST00000177134 795 ntBASIC10.94□□□□□ -0.66
Nkx3-2P97503 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.94□□□□□ -0.66
Nkx3-2P97503 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.94□□□□□ -0.66
Nkx3-2P97503 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.94□□□□□ -0.66
Nkx3-2P97503 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx3-2P97503 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm12029-201ENSMUST00000120073 832 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms