Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.66□□□□□ -0.86
SgcaP82350 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SgcaP82350 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.66□□□□□ -0.86
SgcaP82350 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.66□□□□□ -0.86
SgcaP82350 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
SgcaP82350 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Gm26927-201ENSMUST00000182385 965 ntBASIC9.66□□□□□ -0.86
SgcaP82350 Gm38241-201ENSMUST00000192641 898 ntBASIC9.66□□□□□ -0.86
SgcaP82350 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.66□□□□□ -0.86
SgcaP82350 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.66□□□□□ -0.86
SgcaP82350 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Gm10254-201ENSMUST00000052888 867 ntBASIC9.66□□□□□ -0.86
SgcaP82350 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcaP82350 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.65□□□□□ -0.86
SgcaP82350 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.65□□□□□ -0.86
SgcaP82350 Gm12138-201ENSMUST00000122180 951 ntBASIC9.65□□□□□ -0.86
SgcaP82350 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.65□□□□□ -0.86
SgcaP82350 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.65□□□□□ -0.86
SgcaP82350 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SgcaP82350 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcaP82350 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.65□□□□□ -0.87
SgcaP82350 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SgcaP82350 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.65□□□□□ -0.87
SgcaP82350 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms