Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm8464-202ENSMUST00000146697 1142 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Gm4750-201ENSMUST00000151942 1142 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Gm23432-201ENSMUST00000157181 131 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Gm22763-201ENSMUST00000158374 107 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Cux2P70298 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cux2P70298 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Gm42971-201ENSMUST00000199228 2079 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Cux2P70298 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Cux2P70298 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Gm45416-201ENSMUST00000209713 2201 ntBASIC18.52■□□□□ 0.56
Cux2P70298 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Gm14997-201ENSMUST00000119232 636 ntBASIC18.52■□□□□ 0.56
Cux2P70298 Mup-ps29-201ENSMUST00000122281 202 ntBASIC18.52■□□□□ 0.56
Cux2P70298 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC18.52■□□□□ 0.56
Cux2P70298 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC18.52■□□□□ 0.56
Cux2P70298 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Gm7242-201ENSMUST00000221134 705 ntBASIC18.52■□□□□ 0.56
Cux2P70298 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cux2P70298 Gm17541-201ENSMUST00000080062 525 ntBASIC18.52■□□□□ 0.56
Cux2P70298 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cux2P70298 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cux2P70298 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cux2P70298 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cux2P70298 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cux2P70298 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cux2P70298 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cux2P70298 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cux2P70298 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Cux2P70298 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Cux2P70298 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC18.51■□□□□ 0.55
Cux2P70298 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm8525-201ENSMUST00000189674 861 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm8268-201ENSMUST00000209683 458 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gm45893-201ENSMUST00000211899 247 ntBASIC18.51■□□□□ 0.55
Cux2P70298 AC154585.1-201ENSMUST00000218917 997 ntBASIC18.51■□□□□ 0.55
Cux2P70298 AC153153.1-201ENSMUST00000225803 793 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Krtap6-3-201ENSMUST00000079151 444 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gm16477-201ENSMUST00000085365 801 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gm17415-201ENSMUST00000096427 789 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC18.51■□□□□ 0.55
Cux2P70298 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cux2P70298 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Gm38385-201ENSMUST00000194454 2351 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cux2P70298 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC18.51■□□□□ 0.55
Cux2P70298 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC18.5■□□□□ 0.55
Cux2P70298 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC18.5■□□□□ 0.55
Cux2P70298 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cux2P70298 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cux2P70298 Mir6934-201ENSMUST00000183965 62 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC18.5■□□□□ 0.55
Cux2P70298 Gm8828-201ENSMUST00000196786 1290 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Gm18124-201ENSMUST00000210695 706 ntBASIC18.5■□□□□ 0.55
Cux2P70298 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 AC090962.2-201ENSMUST00000225064 1801 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Ssr1-203ENSMUST00000225246 1825 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Gm8725-201ENSMUST00000221829 1333 ntBASIC18.5■□□□□ 0.55
Cux2P70298 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cux2P70298 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms