Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.81□□□□□ -0.52
Ybx1P62960 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ybx1P62960 Gm11960-201ENSMUST00000122068 925 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Gm25554-201ENSMUST00000158075 113 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Gm18463-201ENSMUST00000207258 474 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.81□□□□□ -0.52
Ybx1P62960 Gm6722-201ENSMUST00000221586 390 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.81□□□□□ -0.52
Ybx1P62960 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ybx1P62960 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ybx1P62960 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ybx1P62960 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ybx1P62960 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Ybx1P62960 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm12783-201ENSMUST00000121425 397 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.8□□□□□ -0.52
Ybx1P62960 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.8□□□□□ -0.52
Ybx1P62960 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.8□□□□□ -0.52
Ybx1P62960 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm26989-201ENSMUST00000182608 749 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 Gm19587-201ENSMUST00000191395 545 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Ybx1P62960 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm18460-201ENSMUST00000208088 464 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm7082-201ENSMUST00000209880 969 ntBASIC11.8□□□□□ -0.52
Ybx1P62960 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ybx1P62960 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.8□□□□□ -0.52
Ybx1P62960 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.8□□□□□ -0.52
Ybx1P62960 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ybx1P62960 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ybx1P62960 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ybx1P62960 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms