Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Gm7029-201ENSMUST00000173226 450 ntBASIC10.42□□□□□ -0.74
Lsm3P62311 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.42□□□□□ -0.74
Lsm3P62311 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Gm43575-201ENSMUST00000196420 516 ntBASIC10.42□□□□□ -0.74
Lsm3P62311 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Lsm3P62311 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Lsm3P62311 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm3P62311 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gm14999-201ENSMUST00000121039 624 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm3P62311 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.41□□□□□ -0.74
Lsm3P62311 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gm7287-201ENSMUST00000205267 602 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.41□□□□□ -0.74
Lsm3P62311 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Lsm3P62311 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm3P62311 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm3P62311 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm3P62311 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Lsm3P62311 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Lsm3P62311 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.4□□□□□ -0.74
Lsm3P62311 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
Lsm3P62311 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.4□□□□□ -0.74
Lsm3P62311 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.4□□□□□ -0.74
Lsm3P62311 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm3P62311 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.4□□□□□ -0.74
Lsm3P62311 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm3P62311 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm3P62311 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.4□□□□□ -0.74
Lsm3P62311 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.4□□□□□ -0.74
Lsm3P62311 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms