Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Lmo4P61969 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm15197-201ENSMUST00000120526 478 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm9081-201ENSMUST00000182346 991 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm43966-201ENSMUST00000203301 612 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm7082-201ENSMUST00000209880 969 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Lmo4P61969 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.29□□□□□ -0.92
Lmo4P61969 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.29□□□□□ -0.92
Lmo4P61969 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Lmo4P61969 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Lmo4P61969 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm25053-201ENSMUST00000103982 133 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm25922-201ENSMUST00000104281 130 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm13600-201ENSMUST00000117949 744 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.28□□□□□ -0.92
Lmo4P61969 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm24248-201ENSMUST00000157321 322 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm24679-201ENSMUST00000158762 111 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm28833-201ENSMUST00000189671 559 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm25053-202ENSMUST00000199731 132 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm43671-201ENSMUST00000200422 433 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms