Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Rprl1-202ENSMUST00000198476 238 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Gm13296-201ENSMUST00000117854 997 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Gm14277-201ENSMUST00000121195 360 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Gm16505-201ENSMUST00000179981 232 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a1P61620 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.17□□□□□ -0.78
Sec61a1P61620 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a1P61620 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms