Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm37293-201ENSMUST00000191658 295 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm14723-201ENSMUST00000118686 215 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm3329-201ENSMUST00000159873 556 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm2991-201ENSMUST00000173338 480 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.24□□□□□ -0.77
Sf3b6P59708 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm43377-201ENSMUST00000201640 455 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.24□□□□□ -0.77
Sf3b6P59708 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.24□□□□□ -0.77
Sf3b6P59708 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.24□□□□□ -0.77
Sf3b6P59708 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b6P59708 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms