Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Fdft1P53798 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Fdft1P53798 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Fdft1P53798 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Fdft1P53798 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Fdft1P53798 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Fdft1P53798 Gm23949-201ENSMUST00000104027 127 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Fdft1P53798 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Fdft1P53798 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Gm7003-201ENSMUST00000195089 312 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Gm38314-201ENSMUST00000195709 625 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Gm18038-201ENSMUST00000197900 485 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Fdft1P53798 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 Erich3-203ENSMUST00000189969 3460 ntBASIC11.52□□□□□ -0.57
Fdft1P53798 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Fdft1P53798 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.52□□□□□ -0.57
Fdft1P53798 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fdft1P53798 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.51□□□□□ -0.57
Fdft1P53798 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.51□□□□□ -0.57
Fdft1P53798 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Mir877-201ENSMUST00000104738 85 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fdft1P53798 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm12380-201ENSMUST00000119012 544 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm4310-201ENSMUST00000177847 889 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Mir6420-201ENSMUST00000185032 102 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm28937-201ENSMUST00000185413 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm29400-201ENSMUST00000187208 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm28662-201ENSMUST00000188446 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm28251-201ENSMUST00000188835 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm37318-201ENSMUST00000194325 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm38117-201ENSMUST00000194653 939 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm38017-201ENSMUST00000194768 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm37287-201ENSMUST00000195449 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm37793-201ENSMUST00000195548 695 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm6450-201ENSMUST00000200896 574 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm270-201ENSMUST00000223010 976 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Gm807-202ENSMUST00000224929 408 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm8385-201ENSMUST00000058999 643 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fdft1P53798 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Fdft1P53798 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.51□□□□□ -0.57
Fdft1P53798 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fdft1P53798 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms