Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cux1P53564 Gm11993-201ENSMUST00000121861 820 ntBASIC17.46■□□□□ 0.39
Cux1P53564 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cux1P53564 Gm23675-201ENSMUST00000157311 125 ntBASIC17.46■□□□□ 0.39
Cux1P53564 Mir8091-201ENSMUST00000183602 139 ntBASIC17.46■□□□□ 0.39
Cux1P53564 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cux1P53564 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cux1P53564 AC156790.2-201ENSMUST00000227115 568 ntBASIC17.46■□□□□ 0.39
Cux1P53564 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cux1P53564 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cux1P53564 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cux1P53564 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cux1P53564 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cux1P53564 Gm44740-201ENSMUST00000205603 1614 ntBASIC17.46■□□□□ 0.38
Cux1P53564 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cux1P53564 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.45■□□□□ 0.38
Cux1P53564 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cux1P53564 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Gm26119-201ENSMUST00000175601 104 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Gm5210-201ENSMUST00000182150 1010 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Gm7627-201ENSMUST00000183205 999 ntBASIC17.45■□□□□ 0.38
Cux1P53564 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cux1P53564 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC17.45■□□□□ 0.38
Cux1P53564 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC17.45■□□□□ 0.38
Cux1P53564 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC17.45■□□□□ 0.38
Cux1P53564 Gm45258-201ENSMUST00000210042 853 ntBASIC17.45■□□□□ 0.38
Cux1P53564 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cux1P53564 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Cux1P53564 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cux1P53564 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cux1P53564 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Gm6170-201ENSMUST00000187672 1388 ntBASIC17.44■□□□□ 0.38
Cux1P53564 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cux1P53564 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC17.44■□□□□ 0.38
Cux1P53564 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC17.44■□□□□ 0.38
Cux1P53564 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC17.44■□□□□ 0.38
Cux1P53564 AC137871.1-201ENSMUST00000228278 475 ntBASIC17.44■□□□□ 0.38
Cux1P53564 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cux1P53564 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cux1P53564 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Cux1P53564 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC17.44■□□□□ 0.38
Cux1P53564 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Adgrv1-214ENSMUST00000224088 1492 ntBASIC17.44■□□□□ 0.38
Cux1P53564 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cux1P53564 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cux1P53564 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cux1P53564 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cux1P53564 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Cux1P53564 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 Mir6387-201ENSMUST00000184042 108 ntBASIC17.43■□□□□ 0.38
Cux1P53564 Gm43547-201ENSMUST00000197729 328 ntBASIC17.43■□□□□ 0.38
Cux1P53564 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Cux1P53564 Gm6352-201ENSMUST00000203583 1134 ntBASIC17.43■□□□□ 0.38
Cux1P53564 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cux1P53564 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux1P53564 AC164556.1-201ENSMUST00000221318 751 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms