Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdx1P52946 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm7666-201ENSMUST00000146631 819 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm22144-201ENSMUST00000157402 102 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Gm3329-201ENSMUST00000159873 556 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.38□□□□□ -0.59
Pdx1P52946 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm44506-201ENSMUST00000206278 965 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pdx1P52946 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.38□□□□□ -0.59
Pdx1P52946 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.38□□□□□ -0.59
Pdx1P52946 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.38□□□□□ -0.59
Pdx1P52946 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdx1P52946 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Gm11956-201ENSMUST00000119525 512 ntBASIC11.37□□□□□ -0.59
Pdx1P52946 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Gm43966-201ENSMUST00000203301 612 ntBASIC11.37□□□□□ -0.59
Pdx1P52946 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.37□□□□□ -0.59
Pdx1P52946 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdx1P52946 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdx1P52946 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.37□□□□□ -0.59
Pdx1P52946 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Pdx1P52946 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdx1P52946 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdx1P52946 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pdx1P52946 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Pdx1P52946 Gm12247-201ENSMUST00000117585 670 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm11331-201ENSMUST00000119764 288 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm15432-201ENSMUST00000121106 195 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Pdx1P52946 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms