Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.65□□□□□ -0.54
Lhx3P50481 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lhx3P50481 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.65□□□□□ -0.54
Lhx3P50481 Gm11667-201ENSMUST00000119828 486 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Gm16219-201ENSMUST00000120096 274 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Gm24514-201ENSMUST00000174961 285 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Gm29067-201ENSMUST00000190821 470 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.65□□□□□ -0.54
Lhx3P50481 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 Gm5468-202ENSMUST00000227851 682 ntBASIC11.65□□□□□ -0.54
Lhx3P50481 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lhx3P50481 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Lhx3P50481 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lhx3P50481 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lhx3P50481 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lhx3P50481 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lhx3P50481 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lhx3P50481 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lhx3P50481 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lhx3P50481 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.64□□□□□ -0.55
Lhx3P50481 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lhx3P50481 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm12218-201ENSMUST00000117666 399 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Mir7076-201ENSMUST00000183519 74 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm9353-201ENSMUST00000200472 604 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Lhx3P50481 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.64□□□□□ -0.55
Lhx3P50481 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.64□□□□□ -0.55
Lhx3P50481 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lhx3P50481 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lhx3P50481 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Lhx3P50481 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms