Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
Rfx3P48381 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.42□□□□□ -0.74
Rfx3P48381 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Rfx3P48381 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.42□□□□□ -0.74
Rfx3P48381 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rfx3P48381 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Rfx3P48381 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm15004-201ENSMUST00000119192 630 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.41□□□□□ -0.74
Rfx3P48381 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.41□□□□□ -0.74
Rfx3P48381 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm25700-201ENSMUST00000177693 110 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm27627-201ENSMUST00000183644 150 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 Gm37259-201ENSMUST00000193903 849 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.41□□□□□ -0.74
Rfx3P48381 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rfx3P48381 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rfx3P48381 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rfx3P48381 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rfx3P48381 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rfx3P48381 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.4□□□□□ -0.74
Rfx3P48381 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.4□□□□□ -0.74
Rfx3P48381 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.4□□□□□ -0.74
Rfx3P48381 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.4□□□□□ -0.74
Rfx3P48381 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm9192-201ENSMUST00000183221 985 ntBASIC10.4□□□□□ -0.74
Rfx3P48381 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms