Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Gli1P47806 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Gli1P47806 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gli1P47806 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Gm14665-201ENSMUST00000122294 557 ntBASIC11.27□□□□□ -0.61
Gli1P47806 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.27□□□□□ -0.61
Gli1P47806 Gm29615-201ENSMUST00000185371 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28224-201ENSMUST00000186078 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm29001-201ENSMUST00000186177 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Gm28292-201ENSMUST00000186593 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28101-201ENSMUST00000187608 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm29076-201ENSMUST00000187689 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28302-201ENSMUST00000187931 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28646-201ENSMUST00000188220 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28205-201ENSMUST00000189177 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm29032-201ENSMUST00000189797 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm28695-201ENSMUST00000190300 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm37448-201ENSMUST00000192795 697 ntBASIC11.27□□□□□ -0.61
Gli1P47806 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.27□□□□□ -0.61
Gli1P47806 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.27□□□□□ -0.61
Gli1P47806 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Gli1P47806 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.27□□□□□ -0.61
Gli1P47806 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gli1P47806 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gli1P47806 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Gm15131-201ENSMUST00000119124 595 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.26□□□□□ -0.61
Gli1P47806 Gm43002-201ENSMUST00000200310 155 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Gm7848-201ENSMUST00000210739 718 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Gm45770-201ENSMUST00000212105 616 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms