Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nkx2-6P43688 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm4294-201ENSMUST00000105169 614 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm8531-201ENSMUST00000188319 893 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Cog3-203ENSMUST00000227473 4197 ntBASIC10.92□□□□□ -0.66
Nkx2-6P43688 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-6P43688 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm14892-201ENSMUST00000117636 267 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm16219-201ENSMUST00000120096 274 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm24398-201ENSMUST00000157870 109 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm5100-201ENSMUST00000195631 589 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm45594-201ENSMUST00000211717 241 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.91□□□□□ -0.66
Nkx2-6P43688 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms