Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm12015-201ENSMUST00000117065 843 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm12742-201ENSMUST00000117326 410 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm11222-201ENSMUST00000119005 738 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm17420-201ENSMUST00000164753 153 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm31256-201ENSMUST00000194705 506 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm19287-201ENSMUST00000203190 358 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Hist1h1aP43275 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Hist1h1aP43275 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.5□□□□□ -0.89
Hist1h1aP43275 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.49□□□□□ -0.89
Hist1h1aP43275 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms