Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm8661-201ENSMUST00000118688 992 ntBASIC11.85□□□□□ -0.51
HttP42859 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Gm16184-201ENSMUST00000162324 573 ntBASIC11.85□□□□□ -0.51
HttP42859 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11.85□□□□□ -0.51
HttP42859 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC11.85□□□□□ -0.51
HttP42859 Gm9273-201ENSMUST00000200606 715 ntBASIC11.85□□□□□ -0.51
HttP42859 Zkscan7-205ENSMUST00000216462 990 ntBASIC11.85□□□□□ -0.51
HttP42859 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.85□□□□□ -0.51
HttP42859 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.85□□□□□ -0.51
HttP42859 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.85□□□□□ -0.51
HttP42859 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.84□□□□□ -0.51
HttP42859 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 AC134607.1-201ENSMUST00000214707 485 ntBASIC11.84□□□□□ -0.51
HttP42859 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.84□□□□□ -0.51
HttP42859 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
HttP42859 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Gm37486-201ENSMUST00000195663 405 ntBASIC11.84□□□□□ -0.51
HttP42859 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.84□□□□□ -0.51
HttP42859 Gm28653-202ENSMUST00000227082 521 ntBASIC11.84□□□□□ -0.51
HttP42859 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HttP42859 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gm3355-201ENSMUST00000160079 487 ntBASIC11.84□□□□□ -0.51
HttP42859 Gm5766-202ENSMUST00000161633 799 ntBASIC11.84□□□□□ -0.51
HttP42859 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.84□□□□□ -0.51
HttP42859 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
HttP42859 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HttP42859 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.84□□□□□ -0.51
HttP42859 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
HttP42859 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
HttP42859 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HttP42859 Snord17-201ENSMUST00000104526 238 ntBASIC11.83□□□□□ -0.52
HttP42859 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm12047-201ENSMUST00000117561 944 ntBASIC11.83□□□□□ -0.52
HttP42859 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.83□□□□□ -0.52
HttP42859 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
HttP42859 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.83□□□□□ -0.52
HttP42859 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC11.83□□□□□ -0.52
HttP42859 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.83□□□□□ -0.52
HttP42859 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.83□□□□□ -0.52
HttP42859 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
HttP42859 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.83□□□□□ -0.52
HttP42859 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.83□□□□□ -0.52
HttP42859 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HttP42859 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HttP42859 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.83□□□□□ -0.52
HttP42859 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.83□□□□□ -0.52
HttP42859 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HttP42859 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HttP42859 Gm16439-201ENSMUST00000100687 564 ntBASIC11.82□□□□□ -0.52
HttP42859 Gm13002-201ENSMUST00000119286 682 ntBASIC11.82□□□□□ -0.52
HttP42859 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms