Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.55□□□□□ -0.72
Nkx2-2P42586 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-2P42586 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Mir5120-201ENSMUST00000175020 78 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm18367-201ENSMUST00000176139 600 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm19353-201ENSMUST00000184561 445 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm2517-201ENSMUST00000215651 348 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.54□□□□□ -0.72
Nkx2-2P42586 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-2P42586 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm12463-201ENSMUST00000118271 849 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm15352-201ENSMUST00000118696 270 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm15374-201ENSMUST00000119313 844 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm15549-201ENSMUST00000121595 622 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm7741-201ENSMUST00000181445 989 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Mir7686-201ENSMUST00000200604 57 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Gm17825-201ENSMUST00000206836 794 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Spcs1-203ENSMUST00000226374 592 ntBASIC10.53□□□□□ -0.72
Nkx2-2P42586 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx2-2P42586 Olfr584-201ENSMUST00000098210 964 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms