Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.5□□□□□ -0.89
Timp3P39876 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Gm19459-201ENSMUST00000176240 835 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Mir7686-201ENSMUST00000200604 57 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Gm5051-201ENSMUST00000204085 485 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
Timp3P39876 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Timp3P39876 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.5□□□□□ -0.89
Timp3P39876 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Timp3P39876 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Timp3P39876 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Timp3P39876 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Timp3P39876 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm15207-201ENSMUST00000119259 442 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.49□□□□□ -0.89
Timp3P39876 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Timp3P39876 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Timp3P39876 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Gm29499-201ENSMUST00000189151 486 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 Gm28329-201ENSMUST00000191208 689 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm29171-201ENSMUST00000191397 486 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm17831-201ENSMUST00000205579 900 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 Gm45575-201ENSMUST00000210283 548 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.49□□□□□ -0.89
Timp3P39876 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.49□□□□□ -0.89
Timp3P39876 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.49□□□□□ -0.89
Timp3P39876 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Timp3P39876 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Timp3P39876 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.49□□□□□ -0.89
Timp3P39876 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms