Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Usp4P35123 Gm43378-201ENSMUST00000199336 582 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Gm42997-202ENSMUST00000200321 985 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Usp4P35123 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp4P35123 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.1□□□□□ -0.47
Usp4P35123 Gm8712-201ENSMUST00000221090 701 ntBASIC12.1□□□□□ -0.47
Usp4P35123 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Usp4P35123 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp4P35123 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp4P35123 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.09□□□□□ -0.47
Usp4P35123 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Usp4P35123 B9d1os-201ENSMUST00000137010 674 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Usp4P35123 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Gm25700-201ENSMUST00000177693 110 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Gm44262-201ENSMUST00000204969 372 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp4P35123 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp4P35123 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp4P35123 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp4P35123 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.09□□□□□ -0.47
Usp4P35123 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usp4P35123 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.08□□□□□ -0.47
Usp4P35123 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.08□□□□□ -0.47
Usp4P35123 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usp4P35123 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Usp4P35123 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp4P35123 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Usp4P35123 Gm13296-201ENSMUST00000117854 997 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Gm11434-201ENSMUST00000122379 629 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp4P35123 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.08□□□□□ -0.48
Usp4P35123 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp4P35123 Gm28450-201ENSMUST00000187349 638 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp4P35123 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.08□□□□□ -0.48
Usp4P35123 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.08□□□□□ -0.48
Usp4P35123 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Usp4P35123 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp4P35123 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Usp4P35123 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms