Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.2□□□□□ -0.3
Vcam1P29533 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vcam1P29533 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Vcam1P29533 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vcam1P29533 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Vcam1P29533 Gm13445-201ENSMUST00000121664 307 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.2□□□□□ -0.3
Vcam1P29533 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Vcam1P29533 Gm25951-201ENSMUST00000175330 64 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.2□□□□□ -0.3
Vcam1P29533 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vcam1P29533 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vcam1P29533 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vcam1P29533 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vcam1P29533 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vcam1P29533 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Vcam1P29533 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.2□□□□□ -0.3
Vcam1P29533 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vcam1P29533 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Vcam1P29533 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vcam1P29533 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.19□□□□□ -0.3
Vcam1P29533 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm26989-201ENSMUST00000182608 749 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 Gm26976-201ENSMUST00000182929 908 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm9353-201ENSMUST00000200472 604 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.19□□□□□ -0.3
Vcam1P29533 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vcam1P29533 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vcam1P29533 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vcam1P29533 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Matn2-203ENSMUST00000226766 3252 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vcam1P29533 Mir453-201ENSMUST00000104732 82 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Snord23-201ENSMUST00000116828 109 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms