Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm23105-201ENSMUST00000083719 134 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm25766-201ENSMUST00000104101 131 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm11700-201ENSMUST00000119409 403 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm28388-201ENSMUST00000186262 437 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm37028-201ENSMUST00000194276 107 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm37905-201ENSMUST00000195310 341 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm3793-201ENSMUST00000204973 672 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm5996-201ENSMUST00000211110 718 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm45594-201ENSMUST00000211717 241 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nckap1P28660 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Nckap1P28660 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.5□□□□□ -0.57
Nckap1P28660 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.5□□□□□ -0.57
Nckap1P28660 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nckap1P28660 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nckap1P28660 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nckap1P28660 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 411.4 ms