Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gjb1P28230 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gjb1P28230 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gjb1P28230 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.85□□□□□ -0.35
Gjb1P28230 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gjb1P28230 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gjb1P28230 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Gm15329-201ENSMUST00000121408 155 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.84□□□□□ -0.35
Gjb1P28230 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm9192-201ENSMUST00000183221 985 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Mir7051-201ENSMUST00000184167 73 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Mir7035-201ENSMUST00000184713 82 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm33707-201ENSMUST00000195135 569 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 Gm43506-201ENSMUST00000200675 753 ntBASIC12.84□□□□□ -0.35
Gjb1P28230 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.84□□□□□ -0.35
Gjb1P28230 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.84□□□□□ -0.35
Gjb1P28230 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.84□□□□□ -0.35
Gjb1P28230 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Gjb1P28230 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gjb1P28230 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gjb1P28230 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gjb1P28230 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gjb1P28230 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.83□□□□□ -0.35
Gjb1P28230 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.83□□□□□ -0.36
Gjb1P28230 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Gm37851-201ENSMUST00000193871 889 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gjb1P28230 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.83□□□□□ -0.36
Gjb1P28230 Gm6478-201ENSMUST00000099450 742 ntBASIC12.83□□□□□ -0.36
Gjb1P28230 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gjb1P28230 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Gjb1P28230 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Gjb1P28230 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gjb1P28230 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gjb1P28230 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gjb1P28230 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms