Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm25881-201ENSMUST00000157783 103 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm28450-201ENSMUST00000187349 638 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Gm6450-201ENSMUST00000200896 574 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
Ccl6P27784 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm18212-201ENSMUST00000211678 889 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.97□□□□□ -0.97
Ccl6P27784 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 AC107638.1-201ENSMUST00000213690 1061 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm13812-201ENSMUST00000118061 1347 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Gm13810-201ENSMUST00000118584 1347 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.97□□□□□ -0.97
Ccl6P27784 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Ccl6P27784 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccl6P27784 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.96□□□□□ -0.97
Ccl6P27784 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.96□□□□□ -0.97
Ccl6P27784 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Ccl6P27784 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Ccl6P27784 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Gm45776-201ENSMUST00000212366 1522 ntBASIC8.96□□□□□ -0.97
Ccl6P27784 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Ccl6P27784 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Ccl6P27784 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccl6P27784 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Ccl6P27784 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccl6P27784 Gm11663-201ENSMUST00000117888 290 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gm15207-201ENSMUST00000119259 442 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccl6P27784 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
Ccl6P27784 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccl6P27784 Gm18056-201ENSMUST00000207670 568 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gm18061-201ENSMUST00000208350 562 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gm18063-201ENSMUST00000208529 568 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gm18052-201ENSMUST00000208750 559 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccl6P27784 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Ccl6P27784 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Ccl6P27784 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Ccl6P27784 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ccl6P27784 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.96□□□□□ -0.98
Ccl6P27784 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccl6P27784 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 771.8 ms