Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm23272-201ENSMUST00000104053 129 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm12247-201ENSMUST00000117585 670 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Gm8111-201ENSMUST00000117659 987 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Gm15374-201ENSMUST00000119313 844 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Gm8737-201ENSMUST00000122208 642 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.6□□□□□ -0.87
Col8a2P25318 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm10807-201ENSMUST00000177134 795 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.6□□□□□ -0.87
Col8a2P25318 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.6□□□□□ -0.87
Col8a2P25318 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col8a2P25318 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col8a2P25318 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.59□□□□□ -0.87
Col8a2P25318 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.59□□□□□ -0.87
Col8a2P25318 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Gm14665-201ENSMUST00000122294 557 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.59□□□□□ -0.87
Col8a2P25318 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
Col8a2P25318 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Gm21092-201ENSMUST00000178995 955 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Gm27438-201ENSMUST00000183480 110 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Gm34023-201ENSMUST00000195539 217 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.59□□□□□ -0.87
Col8a2P25318 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms