Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.47□□□□□ -0.73
Cbx3P23198 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.47□□□□□ -0.73
Cbx3P23198 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm23363-201ENSMUST00000175024 79 ntBASIC10.47□□□□□ -0.73
Cbx3P23198 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.47□□□□□ -0.73
Cbx3P23198 Gm8099-201ENSMUST00000200510 742 ntBASIC10.47□□□□□ -0.73
Cbx3P23198 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cbx3P23198 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cbx3P23198 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.47□□□□□ -0.73
Cbx3P23198 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cbx3P23198 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.47□□□□□ -0.73
Cbx3P23198 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.46□□□□□ -0.73
Cbx3P23198 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 AC165080.1-201ENSMUST00000215257 3123 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Cbx3P23198 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cbx3P23198 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Gm2231-201ENSMUST00000125661 612 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.46□□□□□ -0.73
Cbx3P23198 Gm23984-201ENSMUST00000157139 203 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Cbx3P23198 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.46□□□□□ -0.73
Cbx3P23198 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.46□□□□□ -0.73
Cbx3P23198 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.46□□□□□ -0.73
Cbx3P23198 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Gm7287-201ENSMUST00000205267 602 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Gm8463-201ENSMUST00000208573 613 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.46□□□□□ -0.73
Cbx3P23198 Gm807-202ENSMUST00000224929 408 ntBASIC10.46□□□□□ -0.73
Cbx3P23198 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cbx3P23198 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cbx3P23198 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.46□□□□□ -0.73
Cbx3P23198 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.46□□□□□ -0.74
Cbx3P23198 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.46□□□□□ -0.74
Cbx3P23198 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.46□□□□□ -0.74
Cbx3P23198 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.46□□□□□ -0.74
Cbx3P23198 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cbx3P23198 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms